MAgPIE - An Open Source land-use modeling framework

4.8.2

created with goxygen 1.4.4

Yields (14_yields)

Description

The yields module simulates the temporal development of crop yields and pasture productivity. Spatially explicit information on pasture productivity and crop yields under both rainfed and irrigated conditions is provided by the global gridded crop model LPJmL (Lund-Potsdam-Jena with managed Land) (Bondeau et al. 2007). In the initial year of the simulation period, crop yields and pasture productivity are calibrated at the regional level to meet the observed cropland and pasture area as reported by FAO (FAOSTAT 2016). For the simulation of the temporal development of agricultural yields, the module receives information about the agricultural land use intensity represented by the \(\tau\) factor coming from the module 13_tc. Irrigated yields can optionally be calibrated to meet irrigated-rainfed country-level yield ratios as reported by Aquastat (FAO 2016).

The module returns yields for all crops and for pasture, which is then used by the modules [30_crop] and 31_past.

Interfaces

Interfaces to other modules

Input

module inputs (A: managementcalib_aug19)
  Description Unit A
fm_carbon_density
(t_all, j, land, c_pools)
LPJmL carbon density for land and carbon pools \(tC/ha\) x
fm_croparea
(t_all, j, w, kcr)
Different croparea type areas \(10^6 ha\) x
fm_tau1995
(h)
Agricultural land use intensity tau in 1995 \(1\) x
pcm_tau
(h, tautype)
Tau factor of the previous time step \(1\) x
pm_carbon_density_other_ac
(t_all, j, ac, ag_pools)
Above ground other land carbon density for age classes and carbon pools \(tC/ha\) x
pm_carbon_density_plantation_ac
(t_all, j, ac, ag_pools)
Above ground plantation carbon density for age classes and carbon pools \(tC/ha\) x
pm_carbon_density_secdforest_ac
(t_all, j, ac, ag_pools)
Above ground secondary forest carbon density for age classes and carbon pools \(tC/ha\) x
pm_climate_class
(j, clcl)
Koeppen-Geiger climate classification on the simulation cluster level \(1\) x
pm_land_start
(j, land)
Land initialization area \(10^6 ha\) x
pm_past_mngmnt_factor
(t, i)
Regional pasture management intensification factor \(1\) x
sm_fix_cc year until which all parameters affected by cc are fixed to historical values \(year\) x
vm_tau
(h, tautype)
Agricultural land use intensity tau \(1\) x

Output

module outputs
  Description Unit
pm_timber_yield
(t, j, ac, land_timber)
Forest growing stock \(tDM/ha/yr\)
pm_yields_semi_calib
(j, kve, w)
Potential yields calibrated to FAO regional levels \(tDM/ha/yr\)
vm_yld
(j, kve, w)
Yields (variable because of technical change) \(tDM/ha/yr\)

Realizations

(A) managementcalib_aug19

The managementcalib_aug19 realization reads in the LPJmL data and performs a number of calibrations. First, a bioenergy yield correction is performed. As there is currently no robust information on bioenergy yields available in (FAOSTAT 2016), it is assumed that the LPJmL yields for bioenergy correspond to the yields achieved under the highest currently observed value of the \(\tau\) factor representing agricultural land-use intensity. Secondly, pasture yields are calculated based on pasture demand to account for in- and extensification of managed grasslands. Thirdly, irrigated yields are scaled to meet the irrigated-to-rainfed yield ratio as provided by AQUASTAT (FAO 2016). Finally, crop yields are calibrated to FAO (FAOSTAT 2016) regional yield levels of the initial time step. An additional feature of this realization is to allow crop yields technological change from the precedent times step to spillover to pasture areas. This realization also calculates the growth stocks in commercial plantations and natural vegetation using LPJmL Carbon stocks.

Technological change can increase the initial calibrated yields by:

\[\begin{multline*} vm\_yld(j2,kcr,w) = \sum_{ct}i14\_yields\_calib(ct,j2,kcr,w) \cdot \sum_{cell(i2,j2), supreg(h2,i2)}\left(\frac{ vm\_tau(h2,"crop") }{ fm\_tau1995(h2)}\right) \end{multline*}\]

For the current time step of the optimization, cellular yields of irrigated and rainfed crops are calculated by multiplying calibrated input yields from LPJmL with the intensification rate relative to the initial time step 1995. In the case of pasture yields, technological change cannot be fully translated into yield increases, to address that, an exogenous pasture management factor pm_past_mngmnt_factor is used to scale pasture yields based on the number of cattle reared to fulfill the domestic demand for ruminant livestock products in module 70.

Additionally, the parameter s14_yld_past_switch can be used to capture a certain magnitude of spillovers of the yield increase due to technological change from the time step before. It can range from 0 (no spillover) to 1 (full spillover).

\[\begin{multline*} vm\_yld(j2,"pasture",w) = \sum_{ct}\left(i14\_yields\_calib(ct,j2,"pasture",w) \cdot \sum_{cell(i2,j2)}pm\_past\_mngmnt\_factor(ct,i2)\right) \cdot \left(1 + s14\_yld\_past\_switch \cdot \left(\sum_{cell(i2,j2), supreg(h2,i2)}\left(\frac{ pcm\_tau\left(h2, "crop"\right)}{fm\_tau1995(h2)}\right) - 1\right)\right) \end{multline*}\]

The following equations calibrate the cellular yield patterns (f14_yields) to match FAO historical yields (f14_fao_yields_hist) by calculating a calibration term called ‘i14_managementcalib’. For most cases, ‘i14_managementcalib’ is the ratio of the historical yields reported by FAO (f14_fao_yields_hist) and regional mean yields (i14_modeled_yields_hist) given historic crop area patterns (‘fm_croparea’) and cellular yields coming from crop models like LPJmL (f14_yields). In these cases, ‘i14_managementcalib’ represents a purely relative calibration factor that depends only on the initial conditions of the starting year.

However, when FAO yields are significantly higher than given by the cellular yield inputs (underestimated baseline), the relative calibration terms can lead to unrealistically large yields in the case of future yield increases within the cellular yield patterns.

To address this issue, the factor i14_lambda_yields determines the degree to which the baseline (FAO) is under- or overestimated and therefore controls whether the calibration factor is applied as an absolute or relative change. For overestimated FAO yields, i14_lambda_yields is 1, which is equivalent to an entirely relative calibration. For underestimated yields, i14_lambda_yields is calculated as the squared root of the ratio between LPJmL yields and FAO historical yields, and as i14_lambda_yields approaches 0, it reduces the applied relative change resulting in a mean change increasingly similar to an additive term (Heinke et al. (2013)). This concept is referred to as limited calibration, as it limits the calibration to an additive term in case of a strongly underestimated baseline. The scalar s14_limit_calib can be used to switch limited calibration on (1) and off (0).

i14_croparea_total(t_all,w,j) = sum(kcr, fm_croparea(t_all,j,w,kcr));

Historic crop area patterns (fm_croprea) are used to calculate regional yields (i14_modeled_yields_hist) from the given cellular input pattern. In rare cases where a region has no crop area reported for a given crop type, the total crop area is used to calculate a proxy yield for the calibration, given by the following equation:

i14_modeled_yields_hist(t_past,i,knbe14)
   = (sum((cell(i,j),w), fm_croparea(t_past,j,w,knbe14) * f14_yields(t_past,j,knbe14,w)) /
      sum((cell(i,j),w), fm_croparea(t_past,j,w,knbe14)))$(sum((cell(i,j),w), fm_croparea(t_past,j,w,knbe14))>0.00001)
   + (sum((cell(i,j),w), i14_croparea_total(t_past,w,j) * f14_yields(t_past,j,knbe14,w)) /
      sum((cell(i,j),w), i14_croparea_total(t_past,w,j)))$(sum((cell(i,j),w), fm_croparea(t_past,j,w,knbe14))<0.00001);

The factor i14_lambda_yields is calculated for the initial time step depending on the setting s14_limit_calib and is then held constant for all other time steps. The regional FAO yield and regional yield of the crop model input of the initial time step is kept constant in the two parameters i14_fao_yields_hist and i14_modeled_yields_hist:

loop(t,
     if(sum(sameas(t,"y1995"),1)=1,
          if    ((s14_limit_calib = 0),
               i14_lambda_yields(t,i,knbe14) = 1;
          Elseif (s14_limit_calib =1 ),
               i14_lambda_yields(t,i,knbe14) =
                    1$(f14_fao_yields_hist(t,i,knbe14) <= i14_modeled_yields_hist(t,i,knbe14))
                    + sqrt(i14_modeled_yields_hist(t,i,knbe14)/f14_fao_yields_hist(t,i,knbe14))$
                    (f14_fao_yields_hist(t,i,knbe14) > i14_modeled_yields_hist(t,i,knbe14));
          );
          i14_fao_yields_hist(t,i,knbe14) = f14_fao_yields_hist(t,i,knbe14);
     Else
          i14_modeled_yields_hist(t,i,knbe14) = i14_modeled_yields_hist(t-1,i,knbe14);
          i14_FAO_yields_hist(t,i,knbe14)  = i14_fao_yields_hist(t-1,i,knbe14);
          i14_lambda_yields(t,i,knbe14)   = i14_lambda_yields(t-1,i,knbe14);
     );
);

The calibrated cellular yield i14_yields_calib is calculated for each time step depending on the constant values i14_modeled_yields_hist, i14_fao_yields_hist, i14_lambda_yields and the uncalibrated, cellular yield f14_yields following the idea of eq. (9) in (Heinke et al. 2013):

i14_managementcalib(t,j,knbe14,w) =
  1 + (sum(cell(i,j), i14_fao_yields_hist(t,i,knbe14) - i14_modeled_yields_hist(t,i,knbe14)) /
                             f14_yields(t,j,knbe14,w) *
      (f14_yields(t,j,knbe14,w) / (sum(cell(i,j),i14_modeled_yields_hist(t,i,knbe14))+10**(-8))) **
                             sum(cell(i,j),i14_lambda_yields(t,i,knbe14)))$(f14_yields(t,j,knbe14,w)>0);
i14_yields_calib(t,j,knbe14,w)    = i14_managementcalib(t,j,knbe14,w) * f14_yields(t,j,knbe14,w);
pm_yields_semi_calib(j,knbe14,w)  = i14_yields_calib("y1995",j,knbe14,w);

Note that the calculation is split into two parts for better readability. Irrigated yields are calibrated to meet the country-level ratio between irrigated and rainfed yields reported by Aquastat. This can be de-activated with the switch s14_calib_ir2rf.

if ((s14_calib_ir2rf = 1),
  i14_calib_yields_hist(i,w)
     = sum((cell(i,j), knbe14), fm_croparea("y1995",j,"irrigated",knbe14) * i14_yields_calib("y1995",j,knbe14,w)) /
       sum((cell(i,j), knbe14), fm_croparea("y1995",j,"irrigated",knbe14));
  i14_calib_yields_ratio(i) = i14_calib_yields_hist(i,"irrigated") / i14_calib_yields_hist(i,"rainfed");
  i14_target_ratio(i) = max(i14_calib_yields_ratio(i), f14_ir2rf_ratio(i));
  i14_yields_calib(t,j,knbe14,"irrigated") = sum((cell(i,j)), i14_target_ratio(i) / i14_calib_yields_ratio(i)) *
                                               i14_yields_calib(t,j,knbe14,"irrigated");
  i14_modeled_yields_hist2(i,knbe14)
   = (sum((cell(i,j),w), fm_croparea("y1995",j,w,knbe14) * i14_yields_calib("y1995",j,knbe14,w)) /
      sum((cell(i,j),w), fm_croparea("y1995",j,w,knbe14)))$(sum((cell(i,j),w), fm_croparea("y1995",j,w,knbe14))>0.00001)
   + (sum((cell(i,j),w), i14_croparea_total("y1995",w,j) * f14_yields("y1995",j,knbe14,w)) /
      sum((cell(i,j),w), i14_croparea_total("y1995",w,j)))$(sum((cell(i,j),w), fm_croparea("y1995",j,w,knbe14))<0.00001);
  i14_yields_calib(t,j,knbe14,w) = sum((cell(i,j)), i14_fao_yields_hist("y1995",i,knbe14) /
                                                      i14_modeled_yields_hist2(i,knbe14)) *
                                   i14_yields_calib(t,j,knbe14,w);
  pm_yields_semi_calib(j,knbe14,w)  = i14_yields_calib("y1995",j,knbe14,w);
);

Calibrated yields can additionally be adjusted by calibration factors ‘f14_yld_calib’ determined in a calibration run. As MAgPIE optimizes yield patterns and FAO regional yields are outlier corrected, historical production and croparea can in some cases be better represented with this additional correction:

if(s14_use_yield_calib = 0 OR sum((i,ltype14),f14_yld_calib(i,ltype14)) = 0,
  f14_yld_calib(i,ltype14) = 1;
);
i14_yields_calib(t,j,kcr,w)       = i14_yields_calib(t,j,kcr,w)
                                    * sum(cell(i,j),f14_yld_calib(i,"crop"));
i14_yields_calib(t,j,"pasture",w) = i14_yields_calib(t,j,"pasture",w)
                                    * sum(cell(i,j),f14_yld_calib(i,"past"));

Land degradation can negatively affect yields. Soil loss for example can notably affect land productivity. Similarly, the yield of pollinator-dependent crops is reduced when there is a lack of pollinators. To account for the impacts of degradation, calibrated yields are multiplied by the share of land with intact NCP in each cell and specific yield reduction coefficients that represent yield loss due to soil erosion and pollination deficiency on non-intact land.

if(sum((t,j,ncp_type14),f14_yld_ncp_report(t,j,ncp_type14)) = 0,
  f14_yld_ncp_report(t,j,ncp_type14) = 1;
);
if ((s14_degradation = 1),
  i14_yields_calib(t,j,kcr,w) = i14_yields_calib(t,j,kcr,w) * (1 - s14_yld_reduction_soil_loss)
                                + i14_yields_calib(t,j,kcr,w) * s14_yld_reduction_soil_loss * f14_yld_ncp_report(t,j,"soil_intact");
  i14_yields_calib(t,j,kcr,w) = i14_yields_calib(t,j,kcr,w) * (1 - f14_kcr_pollinator_dependence(kcr))
                                + i14_yields_calib(t,j,kcr,w) * f14_kcr_pollinator_dependence(kcr) * f14_yld_ncp_report(t,j,"poll_suff");
);

carbon density. We convert Carbon density in tC/ha to tDM/ha by using carbon fraction of s14_carbon_fraction in tC/tDM. For assessing wood harvesting we need only aboveground biomass information, therefore we multiply with aboveground f14_aboveground_fraction. Additionally, we divide aboveground tree biomass by biomass conversion and expansion (BCE) factor to get stem biomass in tDM/ha.

Limitations The exogenous implementation of pasture intensification cannot capture feedbacks between land scarcity and efforts to improve pasture management. Moreover, the magnitude of spillover effects from technological change in the crop sector towards improvements in pasture management is very uncertain.

Definitions

Objects

module-internal objects (A: managementcalib_aug19)
  Description Unit A
f14_aboveground_fraction
(land_timber)
Root to shoot ratio \(1\) x
f14_fao_yields_hist
(t_all, i, kcr)
FAO yields per region \(tDM/ha/yr\) x
f14_ipcc_bce
(clcl, forest_type)
IPCC Biomass Conversion and Expansion factors \(1\) x
f14_ir2rf_ratio
(i)
AQUASTAT ratio of irrigated to rainfed yields per region \(1\) x
f14_kcr_pollinator_dependence
(kcr)
Share of total yield dependent on biotic pollination \(1\) x
f14_pyld_hist
(t_all, i)
Modelled regional pasture yields in the past \(tDM/ha/yr\) x
f14_yields
(t_all, j, kve, w)
LPJmL potential yields per cell (rainfed and irrigated) \(tDM/ha/yr\) x
f14_yld_calib
(i, ltype14)
Calibration factor for the LPJmL yields \(1\) x
f14_yld_ncp_report
(t_all, j, ncp_type14)
Share of land with intact natures contributions to people (NCP) \(1\) x
i14_calib_yields_hist
(i, w)
Calibrated yields average over region and crop type at the historical reference year \(tDM/ha/yr\) x
i14_calib_yields_ratio
(i)
Irrigated to rainfed yield ratio for calibrated yields \(1\) x
i14_croparea_total
(t_all, w, j)
Cellular croparea \(10^6 ha\) x
i14_fao_yields_hist
(t, i, kcr)
FAO yields per region at the historical referende year \(tDM/ha/yr\) x
i14_lambda_yields
(t, i, kcr)
Scaling factor for non-linear management calibration \(1\) x
i14_managementcalib
(t, j, kcr, w)
Regional management calibration factor accounting for FAO yield levels \(1\) x
i14_modeled_yields_hist
(t_all, i, kcr)
Biophysical input yields average over region and water supply type at the historical reference year \(tDM/ha/yr\) x
i14_modeled_yields_hist2
(i, knbe14)
Calibrated yields average over region and water supply type at the historical reference year \(tDM/ha/yr\) x
i14_target_ratio
(i)
Target irrigated to rainfed ratio as upper bound \(1\) x
i14_yields_calib
(t, j, kve, w)
Calibrated biophysical input yields (excluding technological change) \(tDM/ha/yr\) x
p14_pyield_corr
(t, i)
Regional pasture management correction for historical time steps \(1\) x
p14_pyield_LPJ_reg
(t_all, i)
Regional average input yields aggregated from clusters with initial pasture area as weights \(tDM/ha/yr\) x
q14_yield_crop
(j, kcr, w)
Crop yields \(tDM/ha/yr\) x
q14_yield_past
(j, w)
Pasture yields \(tDM/ha/yr\) x
s14_calib_ir2rf Switch to calibrate rainfed to irrigated yield ratios \(1=calib 0=not calib\) x
s14_carbon_fraction Carbon fraction for conversion of biomass to dry matter \(1\) x
s14_degradation Switch to include yield impacts of land degradation(0=no degradation 1=with degradation) x
s14_limit_calib Relative managament calibration switch \(1=limited 0=pure relative\) x
s14_minimum_wood_yield Minimum wood yield for timber harvest in natural vegetation \(tDM/ha/yr\) x
s14_use_yield_calib Switch for using or not using yield calibration factors from the preprocessing \(1=use facs 0=not use facs\) x
s14_yld_past_switch Spillover parameter for translating technological change in the crop sector into pasture yield increases \(1\) x
s14_yld_reduction_soil_loss Decline of land productivity in areas with severe soil loss \(1\) x

Sets

sets in use
  description
ac Age classes
ag_pools(c_pools) Above ground carbon pools
c_pools Carbon pools
cell(i, j) number of LPJ cells per region i
clcl climate classification types
ct(t) Current time period
factors factors included in factor requirements
forest_type forest type
h all superregional economic regions
h2(h) Superregional (dynamic set)
i all economic regions
i2(i) World regions (dynamic set)
j number of LPJ cells
j2(j) Spatial Clusters (dynamic set)
k(kall) Primary products
kall All products in the sectoral version
kcr(kve) Cropping activities
knbe14(kcr) Cropping activities excluding bioenergy plants
kve(k) Land-use activities
land Land pools
land_natveg(land_timber) Natural vegetation land pools
land_timber(land) land from which timber can be taken away
ltype14 calibration land types
ncp_type14 natures contributions to people (NCP) relevant for agricultural yields
supreg(h, i) mapping of superregions to its regions
t_all(t_ext) 5-year time periods
t_past(t_all) Timesteps with observed data
t(t_all) Simulated time periods
tautype tc type
type GAMS variable attribute used for the output
w Water supply type

Authors

Jan Philipp Dietrich, Isabelle Weindl, Florian Humpenöder, Anne Biewald, Kristine Karstens

See Also

09_drivers, 10_land, 13_tc, 17_production, 30_croparea, 31_past, 32_forestry, 35_natveg, 45_climate, 52_carbon, 70_livestock

References

Bondeau, Alberte, Pascalle C. Smith, Sönke Zaehle And Sibyll Schaphoff, Wolfgang Lucht, Wolfgang Cramer, Dieter Gerten, Hermann Lotze-Campen, Christoph Müller, Markus Reichstein, and Benjamin Smith. 2007. “Modelling the Role of Agriculture for the 20th Century Global Terrestrial Carbon Balance.” Global Change Biology 13 (3): 679–706. https://doi.org/10.1111/j.1365-2486.2006.01305.x.
FAO. 2016. AQUASTAT Core Database. Rome: Food; Agriculture Organization of the United Nations (FAO). {https://data.harvestportal.org/de/dataset/fao-aquastat/resource/c4668555-eb76-4882-83b1-230038e24f02?inner_span=True}.
FAOSTAT. 2016. FAOSTAT Database.” Rome: The Food; Agriculture Organization of the United Nations (FAO). http://www.fao.org/faostat/en/.
Heinke, J., S. Ostberg, S. Schaphoff, K. Frieler, C. Müller, D. Gerten, M. Meinshausen, and W. Lucht. 2013. “A New Climate Dataset for Systematic Assessments of Climate Change Impacts as a Function of Global Warming.” Geoscientific Model Development 6 (5): 1689–1703. https://doi.org/10.5194/gmd-6-1689-2013.